PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68391.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 83aa    MW: 9693.21 Da    PI: 10.0464
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68391.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH406.9e-132166655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +++Er RR ri +++ +L+el+P+     +k  + a++L ++veY+k+Lq
  EPS68391.1 21 SIAERMRRTRISERMRKLQELVPNM----DKQTNTADMLDLTVEYVKDLQ 66
                689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.5321565IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-161875IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.79E-91968No hitNo description
Gene3DG3DSA:4.10.280.104.6E-152075IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-122171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-102166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
QDRTVTCKIR AKRGCATHPR SIAERMRRTR ISERMRKLQE LVPNMDKQTN TADMLDLTVE  60
YVKDLQKQYK TLCDNQASCK CSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591240.12e-48PREDICTED: transcription factor bHLH130-like isoform X3
RefseqXP_016478335.12e-48PREDICTED: transcription factor bHLH130-like isoform X2
SwissprotQ66GR35e-42BH130_ARATH; Transcription factor bHLH130
TrEMBLS8CU442e-55S8CU44_9LAMI; Uncharacterized protein (Fragment)
STRINGPOPTR_0016s05100.18e-42(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51942437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-33bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]